Software

R

• hdanova: High-dimensional one-way ANOVA via multiplier bootstrap
  • Lopez, M., Lin, Z. and Müller, H.-G. (2019+). Bootstrapping max statistics in high dimensions: Near-parametric rates under weak variance decay and application to functional data and multinomial data. The Annals of Statistics. 48(2): 1214–1229. [arXiv]
  • Lin, Z., Lopez, M. and Müller, H.-G. (2020+). High-dimensional MANOVA via bootstrapping and its application to functional data and sparse count data. [arXiv]
• matrix-manifold: A package implementing the Log-Cholesky framework and other matrix Riemannian manifolds (under development)
  • Lin, Z. (2019). Riemannian geometry of symmetric positive definite matrices via Cholesky decomposition. SIAM Journal on Matrix Analysis and Applications. 40(4): 1353–1370. [PDF][arXiv][bib]
• synfd: A package to synthesize densely/sparsely observed functional data
• mcfda: A package to estimate the mean and covariance functions for functional data
  • Lin, Z. and Wang, J.-L. (2020+). Mean and covariance estimation for functional snippets. Journal of the American Statistical Association. to appear.
  • Lin, Z., Wang, J.-L. and Zhong, Q. (2020+). Basis expansions for functional snippets. [arXiv]
• GTP: A R version of  the GTP  java library (developed by Dr. Megan Owens) to compute geodesic distance and paths between phylogenetic trees in polynomial time. This R package is developed by my former postdoc Dr. Zengyan Fan.

MATLAB

• iRFDA: A framework to analyze Riemannian functional data
  • Lin, Z. and Yao, F. (2019). Intrinsic Riemannian functional data analysis. The Annals of Statistics.  47(6): 3533–3577. [arXiv][bib]