Publications

  • Fan T., Qin R., Zhang Y., Wang J., Fan J. S., Bai X., Yuan W., Huang W., Shi S., Su X. C., Yang D., Lin Z. (2021) Critical role of minor eggcase silk component in promoting spidroin chain alignment and strong fiber formation. (under review).
  • Lee W. H. K., Liu W., Fan J. S., Yang D. (2021) Dengue virus protease activity modulated by dynamics of protease cofactor. Biophys J. 120, 2444-2453.

  • Nguyen T. A., Le S., Lee M., Fan J. S., Yang D., Yan J., Jedd G. (2021) Fungal Wound Healing through Instantaneous Protoplasmic Gelation”. Curr Biol. 31, 271-282.e5.

  • Wang J., Yuan W., Qin R., Fan T., Fan J. S., Huang W., Yang D., Z. Lin Z. (2021) Self-assembly of tubuliform spidroins driven by hydrophobic interactions among terminal domains. Int J Biol Macromol. 166:1141-1148.

  • Zhang J., Fan J. S., Li S., Yang Y., Sun P., Zhu Q., Wang J., Jiang B., Yang D., Liu M. (2020) Structural basis of DNA binding to human YB-1 cold shock domain regulated by phosphorylation. Nucleic Acids Res. 48, 9361-9371.

  • Chakraborty R., Fan J. S. , Lai C. C., Raghuvamsi P. V., Chee P. X., Anand G. S., D. Yang D. (2020) Structural basis of oligomerization of N-terminal domain of spider aciniform silk protein. Int J Mol.Sci. 21, 4466.

  • Zheng P., Nguyen T. A., Wong J. Y., Lee M., Nguyen T. A., Fan J. S. ,Yang D., Jedd G. (2020)  Spitzenkörper assembly mechanisms reveal conserved features of fungal and metazoan polarity scaffolds. Nat Commun. 11, 2830.

  • Bhattacharjya S., Yang D., Yoon H. S. (2020) Special Issue Selected Papers from the 8th Asia-Pacific NMR (APNMR) Symposium: Recent Advances in NMR Spectroscopy, Int J Mol Sci. 21, 4419 (2020).

  • Xiao T., Lu Y., Fan J. S. , Yang D. (2020) Ligand entry into fatty acid binding protein via local unfolding instead of gap widening, Biophys J. 118, 396-402.

  • Kam A., Loo S., Fan J. S. , Sze S. K., Yang D., Tam J. P. (2019) Roseltide rT7 is a disulfide-rich anionic cell-penetrating proteasome inhibiting peptide, J Biol Chem. 294, 19604-19615.

  • Cheng P., Liu D., Chee P. X., Yang D., D. Long D. (2019) Atomistic insights into the functional instability of the second helix of fatty acid binding protein, Biophys J. 117, 239-246.

  • Liu W., Liu X., Zhu G., Lu L., Yang D. (2018) A method for determining structure ensemble of large disordered protein: Application to a mechanosensing protein, J Am Chem Soc. 140, 11276-11285.

  • Tam J. P., Loo S., Nguyen G. K. T., Wang S., Yang D., Kam A. (2018) Ginsentides: Cysteine and glycine-rich peptides with unusual disulfide connectivity from the ginseng family, Sci Rep. 8:16201.

  • Xu D., Li B., Gao J., Liu Z., Niu X., Nshogoza G., Zhang J., Wu J., Su X. C., He W., Ma R., Yang D., Ruan K. (2018)  Ligand proton pseudocontact shifts determined from paramagnetic relaxation dispersion in the limit of NMR intermediate exchange, J Phys Chem Lett. 9, 3361-3367.

  • Zhu G., Liu W., Bao C., Tong D., Ji H., Shen Z., Yang D., Lu L. (2018) Investigating energy-based pool structure selection in the structure ensemble modeling with experimental distance constraints: The example from a multidomain protein Pub1, Proteins 86, 501-514.

  • Zhou Y., Yang D. (2017) Equilibrium folding dynamics of meACP in water, heavy water, and low concentration of urea, Sci Rep. 7, 16156 (2017).

  • Huang W., Zhang Y., Chen Y., Wang Y., Yuan W., Zhang N., Lam T. J., Gong Z., Yang D., Z. Lin Z. (2017) From EST to novel spider silk gene identification for production of spidroin-based biomaterials, Sci Rep. 7, 13354.

  • Fan J. S. , Goh H., Ding K., Xue B., Robinson R. C., & Yang D. (2017) Structural Basis for pH-mediated Regulation of F-actin Severing by Gelsolin Domain 1. Sci Rep. 7, 45230.

  • Wong K. H., Tan W. L., Serra A., Xiao T., Sze S. K., Yang D., & Tam J. P. (2016) Ginkgotides: Proline-Rich Hevein-Like Peptides from Gymnosperm Ginkgo biloba. Front Plant Sci. 7, 1639.

  • Yu B., & Yang D. (2016) Coexistence of multiple minor states of fatty acid binding protein and their functional relevance.” Sci Rep. 6, 34171.
  • Liu, W., Zhang, J., Fan, J. S., Tria, G., Grüber, G., & Yang, D. (2016). A New Method for Determining Structure Ensemble: Application to a RNA Binding Di-Domain Protein. Biophysical journal, 110(9), 1943-1956.
  • Liu, R., Deng, Q., Yang, Z., Yang, D., Han, M. Y., & Liu, X. Y. (2016). “Nano‐Fishnet” Structure Making Silk Fibers Tougher. Advanced Functional Materials.
  • Xiao, T., Fan, J. S., Zhou, H., Lin, Q., & Yang, D. (2016). Local Unfolding of Fatty Acid Binding Protein to Allow Ligand Entry for Binding. Angewandte Chemie International Edition, 55(24), 6869-6872.
  • Zhou, Y., & Yang, D. (2015). 13Cα CEST experiment on uniformly 13C-labeled proteins. Journal of biomolecular NMR, 61(2), 89-94.
  • Khan, H., Killoran, R. C., Brickenden, A., Fan, J., Yang, D., & Choy, W. Y. (2015). Molecular effects of cancer-associated somatic mutations on the structural and target recognition properties of Keap1. Biochemical Journal, 467(1), 141-151.
  • Zhou, Y., & Yang, D. (2014). Effects of J couplings and unobservable minor states on kinetics parameters extracted from CEST data. Journal of Magnetic Resonance, 249, 118-125.
  • Lim, J., Xiao, T., Fan, J., & Yang, D. (2014). An Off‐Pathway Folding Intermediate of an Acyl Carrier Protein Domain Coexists with the Folded and Unfolded States under Native Conditions. Angewandte Chemie International Edition, 53(9), 2358-61.
  • Wang, S., Huang, W., & Yang, D. (2014). Structure and function of C-terminal domain of aciniform spidroin. Biomacromolecules, 15(2), 468-477.
  • Liu, X., & Yang, D. (2013). HN (CA) N and HN (COCA) N experiments for assignment of large disordered proteins. Journal of biomolecular NMR, 57(2), 83-89.
  • Fan, J. S., Zheng, Y., Choy, W. Y., Simplaceanu, V., Ho, N. T., Ho, C., & Yang, D. (2013). Solution structure and dynamics of human hemoglobin in the carbonmonoxy form. Biochemistry, 52(34), 5809-5820.
  • Cino, E., Fan, J., Yang, D., & Choy, W. Y. (2013). 1H, 15N and 13C backbone resonance assignments of the Kelch domain of mouse Keap1. Biomolecular NMR assignments, 7(2), 149-153.
  • J. Lim, S. Yao, M. Graf, C. Winkler, D. W. Yang*, Structure-function analysis of full-length midkine reveals novel residues important for heparin-binding and zebrafish embryogenesis. Biochem J. (2013 Feb 18).
  • B. Jiang, F. Luo, Y. Ding, P. Sun, X. Zhang, L. Jiang, C. Li, X. A.  Mao, D. W. Yang*, C. Tang, M. Liu, NASR: An Effective Approach for Simultaneous Noise and Artifact Suppression in NMR Spectroscopy, Anal. Chem. 85, 2523-8 (2013).
  • Z. Lin, Q. Deng, X. Liu, D.  Yang*, Engineered large spider eggcase silk protein for strong artificial fibers, Adv. Mater. 25, 1216-20 (2013).
  • H. Khan, E. A. Cino, A. Brickenden, J. Fan, D. Yang*, W. Y. Choy, Fuzzy Complex Formation between the Intrinsically Disordered Prothymosin α and the Kelch Domain of Keap1 Involved in the Oxidative Stress Response. J Mol Biol. (doi:pii: S0022-2836(13)00008-9. 10.1016/j.jmb.2013.01.005) (2013).
  • Z. Gao, Z. Lin, W. Huang, C. C. Lai, J. S. Fan, D. Yang*, Structural characterization of minor ampullate spidroin domains and their distinct roles in fibroin solubility and fiber formation. Plos One 8:e56142 (2013).
  • J. Lim, H. Sun, J.S. Fan, I. F. Hameed, J. Lescar, Z. X. Liang, D. Yang*, Rigidifying acyl carrier protein domain in iterative type I PKS CalE8 does not affect its function, Biophys. J. 103, 1037-44 (2012).
  • J. Lai, C. H. Koh, M. Tjota, L. Pieuchot, V. Raman, K. B. Chandrababu, D.  Yang, L. Wong, G. Jedd*, Intrinsically disordered proteins aggregate at fungal cell-to-cell channels and regulate intercellular connectivity. Proc. Natl. Acad. Sci. USA 109, 15781-6 (2012).
  • S. Wang, W. Huang, D.  Yang*, NMR structure note: repetitive domain of aciniform spidroin 1 from Nephila antipodiana. J. Biomol. NMR 54, 415-20 (2012).
  • E. Cino, J. Fan, D. Yang, W. Y. Choy*, (1)H, (15)N and (13)C backbone resonance assignments of the Kelch domain of mouse Keap1. Biomol. NMR Assign. (online) (2012).
  • J. S. Fan, J. Lim, B. Yu, D. Yang*, Measurement of amide hydrogen exchange rates with the use of radiation damping, J. Biomol. NMR 51, 151-162 (2011).
  • J. Lim, R. Kong, E. Murugan, C. L. Ho, Z. X. Liang, D. Yang*, Solution structures of the acyl carrier protein domain from the highly reducing type I iterative polyketide synthase CalE8, PLoS One 6, e20549 (2011).
  • X. Qin, M. Liu, X. Zhang, D. Yang*, Proton NMR based investigation of the effects of temperature and NaCl on micellar properties of CHAPS, J. Phys. Chem. B. 115, 1991-1998 (2011).
  • D.  Yang*, Probing protein side chain dynamics via 13C NMR relaxation, Protein Pept. Lett. 18, 380-395 (2011).
  • D. Long, D. Yang*, Millisecond timescale dynamics of human liver fatty acid binding protein: testing of its relevance to the ligand entry process, Biophys. J. 98, 3054-61 (2010).
  • X. Qin, M. Liu, D. Yang*, X. Zhang*, Concentration-dependent aggregation of CHAPS investigated by NMR spectroscopy, J. Phys. Chem. B. 114, 3863-8 (2010).
  • I. Nudelman, S. R. Akabayov, E. Schnur, Z. Biron, R. Levy, Y. Xu, D. Yang, J. Anglister*, Intermolecular interactions in a 44 kDa interferon-receptor complex detected by asymmetric reverse-Protonation and two-dimensional NOESY, Biochemistry 49, 5117-5133 (2010).
  • J. Y. Goh, C. Y. Lai, L. C. Tan, D. Yang, C. Y. He, Y. C. Liou*, Functional characterization of two novel parvulins in Trypanosoma brucei, FEBS Lett. 584, 2901-8 (2010).
  • Y. Wang, C. Liu, D. Yang, H. Yu*, Y. C. Liou*, AtPP1 encoding a peptidyl-prolyl cis/trans isomerase regulates flowering time in Arabidopsis, Mol. Cell, 37, 112-22 (2010).
  • S. Sriskanthadevan, T. Lee, Z. Lin, D. Yang, C. H. Siu*, Cell adhesion molecule DdCAD-1 is imported into contractile vacuoles by membrane invagination in a Ca2+- and conformation-dependent manner, J Biol Chem. 284, 36377-86 (2009).
  • W. Zhou, Q. Yang, B. C. Low, B. C. Karthik, Y. Wang, A. Ryo, S. Q. Yao, D. Yang, Y. C. Liou*, Pin1 catalyzes conformational changes of Thr-187 in p27Kip1 and mediates its stability through a polyubiquitination process. J. Biol. Chem. 284, 23980-8 (2009).
  • Y. Xu, M. Liu, P. J. Simpson, R. Isaacson, E. Cota, J. Marchant, D. Yang, X. Zhang, P. Freemont, S. Matthews, Automated assignment in selectively methyl-labeled proteins. J Am Chem Soc. 2009 Jul 15;131(27):9480-1.
  • K. B. Chandrababu, B. Ho, D. Yang, Structure, dynamics, and activity of an all-cysteine mutated human beta defensin-3 peptide analogue., Biochemistry. 2009 Jul 7;48(26):6052-61.
  • D. Long, Y. Mu, D. Yang, Molecular dynamics simulation of ligand dissociation from liver fatty acid binding protein., PLoS One. 2009 Jun 30;4(6):e6081.
  • Z. Lin, W. Huang, J. Zhang, D. Yang, Solution Structure of Eggcase Silk Protein and Its Implications for Silk Fiber Formation, Proc. Natl. Acad. Sci. U S A. 2009 Jun 2;106(22):8906-11. Epub 2009 May 20.
  • J. S. Fan, Z. Cheng, J. Zhang, C. Noble, Z. Zhou, H. Song, D. Yang, Solution and crystal structures of mRNA exporter Dbp5p and its interaction with nucleotides, J. Mol. Biol. 388, 1-10 (2009).
  • S. Yang, C. G. Noble, D. Yang, Characterization of DLC1-SAM equilibrium unfolding at the amino acid residue level, Biochemistry 48, 4040-9 (2009).
  • D. Long, D. Yang, Buffer interference with protein dynamics: A case study on human liver fatty acid binding protein, Biophys. J. 96, 1482-8 (2009).
  • D. Zhong, J. Zhang, S. Yang, U. J. K. Soh, J. P. Buschdorf, Y. Zhou, D. Yang, B. C. Low, The SAM domain of RhoGAP deleted in liver cancer-1 binds EF1A1 to regulate cell migration, J. Cell Sci. 122(Pt 3), 414-24 (2009).
  • S. J. Yin, L. Jiang, H. Yi , S. Han, D. Yang, M. Liu, H. Liu, Z. J. Cao, Y. L. Wu, W. X. Li, Different residues in channel turret determining the selectivity of ADWX-1 inhibitor peptide between Kv1.1 and Kv1.3 channels, J. Proteome Res., 7, 4890-97 (2008).
  • I. B. Yeh, M. Xu, W. H. Ng, J. Ye, D. Yang, C. C. Lim, Central neurocytoma: typical magnetic resonance spectroscopy findings and atypical ventricular dissemination, Magn. Reson. Imaging. 26:59-64 (2008).
  • D. Long, M. Liu, D. Yang. Accurately Probing Slow Motions on Millisecond Timescales with a Robust NMR Relaxation Experiment, Journal of the American Chemical Society (2008), 130(8): 2432-2433.
  • Snyder, David A.; Xu, Yingqi; Yang, Daiwen; Br�schweiler, Rafael. Resolution-Enhanced 4D 15N/13C NOESY Protein NMR Spectroscopy by Application of the Covariance Transform, Journal of the American Chemical Society (2007), 129(46): 14126-14127.
  • Hansen, D. Flemming; Yang, Daiwen; Feng, Haniqiao; Zhou, Zheng; Wiesner, Silke; Bai, Yawen; Kay, Lewis E.. An Exchange-Free Measure of 15N Transverse Relaxation: An NMR Spectroscopy Application to the Study of a Folding Intermediate with Pervasive Chemical Exchange, Journal of the American Chemical Society (2007), 129(37): 11468-11479.
  • Xu, Yingqi; Long, Dong; Yang, Daiwen. Rapid data collection for protein structure determination by NMR spectroscopy, Journal of the American Chemical Society (2007), 129(25): 7722-7723.
  • Xie, Hong; Yang, Daiwen; Heller, Adam; Gao, Zhiqiang. Electrocatalytic Oxidation of Guanine, Guanosine, and Guanosine Monophosphate,Biophysical Journal (2007), 92(8): L70-L72.
  • M. Xu, J. Ye, D. Yang, X. Xu, T. T. Yeo, W. H. Ng, C. C. Lim. Ex-vivo NMR of unprocessed tissue in water: a simplified procedure for studying intracranial neoplasms. Anal Bioanal Chem. 2007 Dec;389(7-8):2153-9. Epub 2007 Nov 10.
  • I. B. Yeh, M. Xu, W. H. Ng, J. Ye, D. Yang, C. C. Lim, Central neurocytoma: typical magnetic resonance spectroscopy findings and atypical ventricular dissemination. Magn Reson Imaging. 2008 Jan;26(1):59-64. Epub 2007 Jun 18.
  • Headey, Stephen J.; Huang, He; Claridge, Jolyon K.; Soares, Giselle A.; Dutta, Kaushik; Schwalbe, Martin; Yang, Daiwen; Pascal, Steven M.. NMR structure of stem-loop D from Human Rhinovirus-14, RNA (2007), 13(3): 351-360.
  • Pillai Manoharan, Karuppiah; Fan, Jing-song;Tan Kwong Huat, Benny; Yang, Daiwen. Triterpenoids from Eugenia Grandis: structure elucidation by NMR spectroscopy, Magnetic Resonance in Chemistry (2007), 45(3): 279-281.
  • Pillai Manoharan, Karuppiah; Yang, Daiwen; Hsu, Annie; Tan Kwong Huat, Benny. Evaluation of Polygonum bistorta for anticancer potential using selected cancer cell lines, Medicinal Chemistry (2007), 3(2): 121-126.
  • Andre, E.; Xu, M.; Yang, D.; Siow, J. K.; Yeo, T.T.; Xu, Y.; Lim,C.C.T.. MR spectroscopy in sinus mucocele: N-Acetyl mimics of brain brain N-acetylaspartate, AJNR American journal of neuroradiology(2006),27(10): 2210-2213.
  • Zhang, Lei; Yang, Daiwen. SCAssign: a Sparky extension for the NMR resonance assignment of aliphatic side-chains of uniformly 13C,15N-labeled large proteins, Bioinformatics (2006),22(22): 2833-2834.
  • Lin, Zhi; Sriskanthadevan, Shrivani; Huang, Haibo; Siu, Chi-Hung ; Yang, Daiwen. Solution structures of the adhesion molecule DdCAD-1 reveal new insights into Ca(2+)-dependent cell-cell adhesion, Nature structural & molecular biology. (2006),13(11): 1016-1022.
  • Li, Peng; Sun, Miao;Wohland, Thorsten; Yang, Daiwen; Ho, Bow; Ding, Jeak Lin. Molecular Mechanisms that Govern the Specificity of Sushi Peptides for Gram-Negative Bacterial Membrane Lipids, Biochemistry(2006), 45(35): 10554 – 10562.
  • Xu, Yingqi; Zheng, Yu; Fan, Jing-song; Yang, Daiwen. A novel strategy for structure determination of large proteins without deuteration, Nature Methods(2006),3(11): 931-937.
  • Huang, Weidong; Lin, Zhi; Li, Daiqin; Gong, Zhiyuan; Yang, Daiwen. Characterization and expression of a cDNA encoding a tubuliform silk protein of the golden web spider Nephila antipodiana, Biochimie(2006), 88(7): 849 – 858.
  • Brath, Ulrika; Akke, Mikael; Yang, Daiwen; Kay, Lewis E.; Mulder, Frans A.A.. Functional Dynamics of Human FKBP12 Revealed by Methyl 13C Rotating Frame Relaxation Dispersion NMR Spectroscopy, Journal of the American Chemical Society(2006), 128(17): 5718 – 5727.
  • Lin, Zhi; Huang, Weidong; Yang, Daiwen. Resonance Assignments of a Repeated Domain of the Egg Case Silk from Nephila Antipodiana, J. Biomol. NMR(2006) 36, Suppl. 5: 17.
  • Lin, Zhi; Xu, Yingqi; Yang, Shuai; Yang, Daiwen. Sequence-Specific Assignment of Aromatic Resonances of Uniformly 13C,15N-Labeled Proteins with Use of 13C- and 15N-edited NOESY Spectra, Angew. Chem. Int. Ed. Engl(2006), 45: 1960-1963.
  • Zhang, Xu; Sui, Xiaogang; Yang, Daiwen. Probing methyl dynamics from 13C auto- and cross-correlated relaxation, Journal of the American Chemical Society(2006), 128(15): 5073 – 5081.
  • Pillai Manoharan, Karuppiah; Tan Kwong Huat, Benny; Yang, Daiwen. Cycloartane type triterpenoids from the rhizomes of Polygonum bistorta, phytochemistry (2005), 66(19): 2304-2308.
  • Xu, Yingqi; Lin, Zhi; Chien, Ho; Yang, Daiwen. A general strategy for the assignment of aliphatic side-chain resonances of uniformly 13C,15N-labeled large proteins, Journal of the American Chemical Society(2005), 127(34): 11920 – 11921.
  • Sui, Xiaogang; Xu, Yingqi; Giovannelli, Janel L.; Ho, Nancy T.; Chien, Ho, Yang, Daiwen. Mapping protein-protein interface on the basis of proton density difference. Angewandte Chemie International Edition (2005), 44(32): 5141-5144.
  • Zheng, Yu; Yang, Daiwen. STARS: statistics on inter-atomic distances and torsion angles in protein secondary structures. Bioinformatics (2005), 21(12): 2925-2926.
  • Lin, Zhi; Huang, Haibo; Siu, Chi-Hung; Yang, Daiwen. Letter to the Editor: 1H, 13C, and 15N resonance assignments of Ca2+-free DdCAD-1: A Ca2+-dependent cell-cell adhesion molecule. Journal of Biomolecular NMR (2004), 30(3): 375-376.
  • Zheng, Yu; Giovannelli, Janel L.; Ho, Nancy T.; Ho, Chien; Yang, Daiwen. Side-chain assignments of methyl-containing residues in a uniformly 13C-labeled hemoglobin in the carbonmonoxy form. Journal of Biomolecular NMR (2004), 30(4): 423-429.
  • Wu, Jihui; Fan, Jing-song; Pascal, Steven M.; Yang, Daiwen. General method for suppression of diagonal peaks in heteronuclear-edited NOESY spectroscopy. Journal of the American Chemical Society (2004), 126(46): 15018-15019.
  • Yang, Daiwen; Zheng, Yu; Liu, Dingjiang; Wyss, Daniel F. Sequence-specific assignments of methyl groups in high-molecular weight proteins. Journal of the American Chemical Society (2004), 126(12): 3710-3711.
  • Zheng, Yu; Yang, Daiwen. Measurement of Dipolar Cross-Correlation in Methylene Groups in Uniformly 13C-, 15N-Labeled Proteins. Journal of Biomolecular NMR (2004), 28(2): 103-116.
  • Liu, Weidong; Zheng, Yu; Cistola, David P.; Yang, Daiwen. Measurement of methyl 13C-1H cross-correlation in uniformly 13C-, 15N-, labeled proteins. Journal of Biomolecular NMR (2003), 27(4): 351-364.
  • Fan, Daping; Zheng, Yu; Yang, Daiwen; Wang, Jianjun. NMR Solution Structure and Dynamics of an Exchangeable Apolipoprotein, Locusta migratoria Apolipophorin III. Journal of Biological Chemistry (2003), 278(23): 21212-21220.
  • Ran, Xiaoyuan; Miao, Hong-Hua; Sheu, Fwu-Shan; Yang, Daiwen. Structural and Dynamic Characterization of a Neuron-Specific Protein Kinase C Substrate, Neurogranin. Biochemistry (2003), 42(17): 5143-5150.
  • Evenaes, Johan; Mittermaier, Anthony; Yang, Daiwen; Kay, Lewis E. Measurement of 13Ca-13Cb Dipolar Couplings in 15N,13C,2H-Labeled Proteins: Application to Domain Orientation in Maltose Binding Protein. Journal of the American Chemical Society (2001), 123(12): 2858-2864.
  • Mulder, Frans A. A.; Ayed, Ayeda; Yang, Daiwen; Arrowsmith, Cheryl H.; Kay, Lewis E. Assignment of 1HN, 15N, 13Ca, 13CO and 13Cb resonances in a 67 kDa p53 dimer using 4D-TROSY NMR spectroscopy. Journal of Biomolecular NMR (2000), 18(2): 173-176.
  • Mueller, Geoffrey A.; Choy, W. Y.; Yang, Daiwen; Forman-Kay, Julie D.; Venters, Ronald A.; Kay, Lewis E. Global Folds of Proteins with Low Densities of NOEs Using Residual Dipolar Couplings: Application to the 370-Residue Maltodextrin-binding Protein. Journal of Molecular Biology (2000), 300(1): 197-212.
  • Konrat, Robert; Yang, Daiwen; Kay, Lewis E. A 4D TROSY-based pulse scheme for correlating 1HNi, 15Ni 13Cia, 13C’i-1 chemical shifts in high molecular weight, 15N, 13C, 2H labeled proteins. Journal of Biomolecular NMR (1999), 15(4): 309-313.
  • Skrynnikov, Nikolai R.; Goto, Natalie K.; Yang, Daiwen; Choy, Wing-Yiu; Tolman, Joel R.; Mueller, Geoffrey A.; Kay, Lewis E. Orienting Domains in Proteins Using Dipolar Couplings Measured by Liquid-state NMR: Differences in Solution and Crystal Forms of Maltodextrin Binding Protein Loaded with b-Cyclodextrin. Journal of Molecular Biology (2000), 295(5): 1265-1273.
  • Li, Shun-Cheng; Gish, Gerald; Yang, Daiwen; Coffey, Alison J.; Forman-Kay, Julie D.; Ernberg, Ingemar; Kay, Lewis E.; Pawson, Tony. Novel mode of ligand binding by the SH2 domain of the human XLP disease gene product SAP/SH2D1A. Current Biology (1999), 9(23): 1355-1362.
  • Yang, Daiwen; Venters, Ronald A.; Mueller, Geoffrey A.; Choy, W. Y.; Kay, Lewis E. TROSY-based HNCO pulse sequences for the measurement of 1HN-15N, 15N-13CO, 1HN-13CO, 13CO-13Ca and 1HN-13Ca dipolar couplings in 15N, 13C, 2H-labeled proteins. Journal of Biomolecular NMR (1999), 14(4): 333-343.
  • Yang, Daiwen; Kay, Lewis E. Improved lineshape and sensitivity in the HNCO-family of triple resonance experiments. Journal of Biomolecular NMR (1999), 14(3): 273-276.
  • Yang, Daiwen; Kay, Lewis E. Improved 1HN-detected triple resonance TROSY-based experiments. Journal of Biomolecular NMR (1999), 13(1): 3-10. CODEN: JBNME9 ISSN:0925-2738.
  • Yang, Daiwen; Mok, Yu-Keung; Muhandiram, D. R.; Forman-Kay, Julie D.; Kay, Lewis E. 1H-13C Dipole-Dipole Cross-Correlated Spin Relaxation As a Probe of Dynamics in Unfolded Proteins: Application to the DrkN SH3 Domain. Journal of the American Chemical Society (1999), 121(14): 3555-3556.
  • Yang, Daiwen; Kay, Lewis E. TROSY Triple-Resonance Four-Dimensional NMR Spectroscopy of a 46 ns Tumbling Protein. Journal of the American Chemical Society (1999), 121(11): 2571-2575.
  • Yang, Daiwen; Tolman, Joel R.; Goto, Natalie K.; Kay, Lewis E. An HNCO-based pulse scheme for the measurement of 13Ca-1Ha one-bond dipolar couplings in 15N, 13C labeled proteins. Journal of Biomolecular NMR (1998), 12(2): 325-332.
  • Yang, Daiwen; Kay, Lewis E. Determination of the Protein Backbone Dihedral Angle y from a Combination of NMR-Derived Cross-Correlation Spin Relaxation Rates. Journal of the American Chemical Society (1998), 120(38): 9880-9887.
  • Yang, Daiwen; Gardner, Kevin H.; Kay, Lewis E. A sensitive pulse scheme for measuring the backbone dihedral angle y based on cross-correlation between 13Ca-1Ha dipolar and carbonyl chemical shift anisotropy relaxation interactions. Journal of Biomolecular NMR (1998), 11(2): 213-220.
  • Yang, Daiwen; Mittermaier, Anthony; Mok, Yu-Keung; Kay, Lewis E. A study of protein side-chain dynamics from new 2H auto-correlation and 13C cross-correlation NMR experiments: application to the N-terminal SH3 domain from drk. Journal of Molecular Biology (1998), 276(5): 939-954.
  • Yang, Daiwen; Konrat, Robert; Kay, Lewis E. A Multidimensional NMR Experiment for Measurement of the Protein Dihedral Angle y Based on Cross-Correlated Relaxation between 1Ha-13Ca Dipolar and 13C’ (Carbonyl) Chemical Shift Anisotropy Mechanisms. Journal of the American Chemical Society (1997), 119(49): 11938-11940.
  • Muhandiram, D. R.; Johnson, Philip E.; Yang, Daiwen; Zhang, Ouwen; Mcintosh, Lawrence P.; Kay, Lewis E. Specific 15N, NH correlations for residues in 15N, 13C and fractionally deuterated proteins that immediately follow methyl-containing amino acids. Journal of Biomolecular NMR (1997), 10(3): 283-288.
  • Yang, Daiwen; Mok, Yu-Keung; Forman-Kay, Julie D.; Farrow, Neil A.; Kay, Lewis E. Contributions to protein entropy and heat capacity from bond vector motions measured by NMR spin relaxation. Journal of Molecular Biology (1997), 272(5): 790-804.
  • Yang, Daiwen; Kay, Lewis E. Contributions to conformational entropy arising from bond vector fluctuations measured from NMR-derived order parameters: application to protein folding. Journal of Molecular Biology (1996), 263(2): 369-382.
  • Yang, Daiwen; Kay, Lewis E. The effects of cross correlation and cross relaxation on the measurement of deuterium T1 and T1r relaxation times in 13CH2D spin systems. Journal of Magnetic Resonance, Series B (1996), 110(2): 213-218.
  • Yang, Daiwen; Yamamoto, Kazuhiro; Kanaya, Eiko; Kanaya, Shigenori; Nagayama, Kuniaki. Characterization of an artificial dimer of ribonuclease H using 1H NMR spectroscopy. Journal of Biomolecular NMR (1996), 7(1): 29-34.
  • Yang, Daiwen; Nagayama, Kuniaki. A sensitivity-enhanced method for measuring heteronuclear long-range coupling constants from the displacement of signals in two 1D subspectra. Journal of Magnetic Resonance, Series A (1996), 118(1): 117-121.
  • Yang, Daiwen; Nagayama, Kuniaki. Selective homonuclear Hartmann-Hahn transfer using two coherent r.f. channels: application to relaxation time measurements. Magnetic Resonance in Chemistry (1995), 33(4): 308-311.
  • Yang, Daiwen; Nagayama, Kuniaki. Permeation of small molecules into the cavity of ferritin as revealed by proton nuclear magnetic resonance relaxation. Biochemical Journal (1995), 307(1): 253-256.
  • Yang, Daiwen; Matsubara, Keiko; Yamaki, Mariko; Ebina, Satoshi; Nagayama, Kuniaki. Heterogeneities in ferritin dimers as characterized by gel filtration, nuclear magnetic resonance, electrophoresis, transmission electron microscopy, and gene engineering techniques. Biochimica et Biophysica Acta (1994), 1206(2): 173-179.
  • Yang, Daiwen; Ye, Chaohui. One-dimensional double-quantum magic-angle-spinning NMR of deuterated solids. Solid State Nuclear Magnetic Resonance (1993), 2(4): 147-150.
  • Yang, Daiwen; Ye, Chaohui. Applications of Raman magnetic resonance to heteronuclear spin systems. Magnetic Resonance in Chemistry (1993), 31(11): 995-1000.
  • Li, Fei; Yang, Daiwen; Gao, Ping; Qiu, Zuwen. Deuterium NMR studies on the orientational order generated in strained rubbers. Chemical Research in Chinese Universities (1992), 8(2): 110-113.
  • Yang, Daiwen; Ye, Chaohui. Raman magnetic resonance in AXn systems. Science in China, Series A: Mathematics, Physics, Astronomy & Technological Sciences (1992), 35(7): 842-852.
  • Yang, Daiwen; Xu, Xiaolong; Ye, Chaohui. Application of HMQC to the measurement of J(H,H) homonuclear coupling constants. Magnetic Resonance in Chemistry (1992), 30(8): 711-715.
  • Yang, Daiwen; Ye, Chaohui. Inverse detection of Raman magnetic resonance. Journal of Magnetic Resonance (1969-1992) (1992), 97(2): 271-281.
  • Yang, Daiwen; Ye, Chaohui. Study of the effect of quadrupolar nuclei on the relaxation in an AX system by Raman magnetic resonance. Wuli Xuebao (1991), 40(9): 1533-1538.
  • Yang, Daiwen; Ye, Chaohui. Cross-correlation coefficients of heteronuclear systems: AX, AX2, and AX3. Chemical Physics Letters (1991), 183(3-4): 309-315.
  • Yang, Daiwen; Song, Ruifang; Qiu, Zuwen. Deuterium NMR studies on the intramolecular process of metal ions-meso,2,3-BDTA complexes. Gaodeng Xuexiao Huaxue Xuebao (1990), 11(9): 993-997.
  • Yang, Daiwen; Ye, Chaohui. Raman magnetic resonance in an AX system. Chemical Physics Letters (1990), 173(2-3): 216-219.
  • Yang, Daiwen; Li, Fei; Qiu, Zhuwen. Deuterium NMR of strained swollen crosslinked elastomers: effect of crosslink density on the orientational order of chain segments. Journal of Macromolecular Science, Chemistry (1990), A27(2): 149-165.
  • Luo, Mingdao; Yang, Daiwen; Yan, Xiaoci; Chen, Qiong; Cai, Ruxiu. Color change and ionization equilibrium constant of nitrophenol indicators with HMO [Hueckel molecular orbital] method. Fenxi Huaxue (1986), 14(7): 510-513.